Description of problem: Trying to complete the "module avail" command I get: comm: file 1 is not in sorted order With set -x: $ module load + ...
-name '*. fas' 2>/dev/null | sed -r -e 's/([0-9]+)/ \1/' | sort -k 2 -n | sed -e 's/ ...
Here's an implementation that replaces the first space with % and then joins on the second column of each file. $ cat file2 | sed -e 's/ /%/' | join -1 2 ...
lines that do not start with a tab, writing the line to file.1 , and deleting the line.
Had to resort to a script, still one line: for f in file*.txt; do sed -n 'PAT1/,/PAT2/{/ PAT1!{/PAT2};}' $f >> outputfile; done.
alphanumeric order - only available in my version of sort but not in the standard Unix sort.
Example: Let us suppose there are two sorted files file1.txt and file2.txt
Sort command is helpful to sort/order lines in text files.
I convert the chrX and chrY to chr23 and chr24 with "sed -e 's,chrX,chr23,' -e 's, chrY,chr24,' input.file" and then pipe that into "sort -k 1.4,1n -k 2 ...
Do i need to sort the files before joining them? ... Tagged: awk, columns, files, join, linux, merge, script, shell scripts, sql.